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ttcA protein (Pelagibaca bermudensis) - STRING interaction network
"ttcA" - tRNA 2-thiocytidine biosynthesis protein TtcA in Pelagibaca bermudensis
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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ttcAtRNA 2-thiocytidine biosynthesis protein TtcA ; Required for the thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32) (328 aa)    
Predicted Functional Partners:
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (521 aa)
 
 
  0.864
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
   
    0.855
R2601_27046
Uncharacterized protein (486 aa)
       
  0.741
R2601_14820
33 kDa chaperonin ; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress (327 aa)
 
        0.714
dusA
tRNA-dihydrouridine synthase A ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs (315 aa)
 
   
  0.683
R2601_17227
Diguanylate cyclase, putative (515 aa)
              0.675
R2601_17237
Superoxide dismutase [Cu-Zn] ; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (178 aa)
              0.665
R2601_10659
Helicase, ATP-dependent, putative (511 aa)
 
   
  0.637
lepA
Ribosomal back-translocase LepA ; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (600 aa)
   
 
  0.617
rplI
50S ribosomal protein L9 ; Binds to the 23S rRNA (206 aa)
     
 
  0.596
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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