STRINGSTRING
R2601_17269 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17269" - Sensor histidine kinase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17269Sensor histidine kinase (460 aa)    
Predicted Functional Partners:
R2601_10984
DNA-binding response regulator (142 aa)
   
     
  0.878
R2601_17264
Mercuric reductase, putative (395 aa)
              0.848
R2601_24944
Phosphate regulon transcriptional regulatory protein PhoB (229 aa)
     
  0.719
R2601_16977
Uncharacterized protein (296 aa)
   
          0.669
R2601_10949
DNA-binding response regulator PetR (233 aa)
 
     
  0.655
R2601_17584
Diguanylate cyclase (314 aa)
 
          0.625
R2601_18503
Response regulator (119 aa)
 
          0.616
R2601_26031
2’-deoxycytidine 5’-triphosphate deaminase (358 aa)
   
          0.605
R2601_26256
Nitrogen regulation protein NtrC (457 aa)
 
   
  0.599
R2601_03318
Response Regulator Receiver Signal Transduction Histidine Kinase (130 aa)
 
          0.591
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (8%) [HD]