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R2601_17424 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17424" - RuBisCO operon transcriptional regulator, CbbR in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17424RuBisCO operon transcriptional regulator, CbbR (308 aa)    
Predicted Functional Partners:
R2601_17389
Ribulose-bisphosphate carboxylase form I large subunit CbbL (487 aa)
 
     
  0.920
R2601_17414
Phosphoribulokinase (290 aa)
 
     
  0.906
R2601_17384
Ribulose-bisphosphate carboxylase small chain (139 aa)
 
     
  0.874
R2601_17419
D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 (335 aa)
 
          0.804
R2601_03423
Regulatory protein, LysR-LysR, substrate-binding (345 aa)
   
          0.771
R2601_06368
Transcriptional regulator, LysR family protein (305 aa)
   
     
  0.769
R2601_00570
Transcriptional regulatory protein (308 aa)
   
          0.768
R2601_02603
Transcriptional Regulator, LysR family protein (297 aa)
   
        0.754
R2601_05763
Transcriptional regulator (305 aa)
   
          0.751
R2601_09188
Putative transcriptional regulator (180 aa)
   
   
  0.748
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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