STRINGSTRING
R2601_17629 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17629" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17629Uncharacterized protein (109 aa)    
Predicted Functional Partners:
R2601_14190
Uncharacterized protein (110 aa)
   
          0.778
R2601_09797
Uncharacterized protein (237 aa)
   
          0.778
R2601_18278
Uncharacterized protein (341 aa)
   
          0.773
R2601_19317
Dihydroneopterin aldolase, putative (303 aa)
   
          0.772
R2601_24514
Acyl carrier protein, putative (80 aa)
   
          0.768
R2601_16430
ATP synthase F0, subunit I (115 aa)
   
          0.767
R2601_21276
Uncharacterized protein (84 aa)
   
          0.766
R2601_17082
Rhomboid family protein (228 aa)
   
          0.762
R2601_09078
Lipoprotein, putative (286 aa)
   
          0.761
R2601_17634
Elongation factor P (187 aa)
 
          0.752
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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