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R2601_17649 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17649" - Aminomethyl transferase family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17649Aminomethyl transferase family protein (244 aa)    
Predicted Functional Partners:
R2601_17644
Fructosamine-3-kinase (265 aa)
              0.860
gcvP
Glycine dehydrogenase (aminomethyl-transferring) ; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (948 aa)
         
  0.814
R2601_26906
Dihydrolipoyl dehydrogenase (464 aa)
     
 
    0.788
R2601_10854
Dihydrolipoyl dehydrogenase (464 aa)
     
 
    0.788
R2601_15265
Aminomethyltransferase ; The glycine cleavage system catalyzes the degradation of glycine (375 aa)
     
 
    0.783
folD
Bifunctional protein FolD ; Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate (300 aa)
     
 
    0.783
R2601_17659
Uncharacterized protein (231 aa)
              0.642
R2601_17654
Efflux ABC transporter, transmembrane ATP-binding protein (582 aa)
              0.634
R2601_17664
Serine--glyoxylate transaminase, putative (399 aa)
       
    0.629
R2601_17264
Mercuric reductase, putative (395 aa)
     
 
    0.613
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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