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R2601_17664 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17664" - Serine--glyoxylate transaminase, putative in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17664Serine--glyoxylate transaminase, putative (399 aa)    
Predicted Functional Partners:
R2601_00255
FAD linked oxidase (946 aa)
   
 
  0.906
R2601_23108
2-hydroxyacid dehydrogenase (310 aa)
   
 
  0.903
R2601_10649
D-isomer specific 2-hydroxyacid dehydrogenase family protein (310 aa)
   
 
  0.903
R2601_02143
D-3-phosphoglycerate dehydrogenase (300 aa)
   
 
  0.903
R2601_01818
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein (318 aa)
   
 
  0.903
gcvP
Glycine dehydrogenase (aminomethyl-transferring) ; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (948 aa)
     
 
  0.901
R2601_15150
2-hydroxyacid dehydrogenase (328 aa)
   
 
  0.881
R2601_16555
Ureidoglycolate lyase (165 aa)
     
 
    0.879
R2601_01320
Ureidoglycolate lyase (159 aa)
     
 
    0.879
R2601_18668
Putative sarcosine dehydrogenase protein (853 aa)
   
 
  0.869
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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