STRINGSTRING
R2601_17699 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17699" - Cytochrome c family protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17699Cytochrome c family protein (138 aa)    
Predicted Functional Partners:
R2601_25566
Uncharacterized protein (98 aa)
   
          0.704
R2601_13915
Uncharacterized protein (182 aa)
   
          0.699
R2601_12298
Uncharacterized protein (272 aa)
   
          0.684
R2601_18518
Possible flagellar switch protein FliM (396 aa)
   
          0.674
R2601_26926
Uncharacterized protein (1097 aa)
   
          0.669
R2601_16845
Uncharacterized protein (271 aa)
   
          0.664
R2601_14265
Uncharacterized protein (88 aa)
   
          0.649
R2601_17694
Uncharacterized protein (144 aa)
 
          0.641
R2601_24300
Uncharacterized protein (136 aa)
   
          0.629
R2601_24480
Uncharacterized protein (272 aa)
   
          0.624
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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