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R2601_17814 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17814" - TldD/PmbA family protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17814TldD/PmbA family protein (473 aa)    
Predicted Functional Partners:
R2601_08641
PmbA (448 aa)
 
   
0.761
R2601_17809
Cytochrome c oxidase subunit 2 ; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (287 aa)
              0.721
R2601_23540
Thiamine-phosphate pyrophosphorylase (202 aa)
 
 
  0.695
ctaB
Heme O synthase ; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (316 aa)
              0.663
ctaG
Cytochrome c oxidase assembly protein CtaG ; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I (194 aa)
              0.663
lon
ATP-dependent protease La ; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (801 aa)
 
   
  0.555
R2601_17819
DNA processing protein DprA, putative (375 aa)
              0.529
R2601_14360
NAD(+) synthase (552 aa)
   
   
  0.527
R2601_10624
Rod shape-determining protein MreB (341 aa)
 
        0.526
R2601_17789
Cytochrome c oxidase, aa3-type, subunit III (266 aa)
              0.522
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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