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R2601_17898 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17898" - Acetyltransferase, GNAT family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17898Acetyltransferase, GNAT family protein (178 aa)    
Predicted Functional Partners:
R2601_17903
Uncharacterized protein (249 aa)
              0.765
R2601_17893
Uncharacterized protein (200 aa)
   
        0.756
R2601_15070
HemY domain protein (511 aa)
   
          0.626
R2601_22422
Transferase hexapeptide repeat protein (187 aa)
 
   
    0.613
R2601_09008
Ribosomal-protein-alanine acetyltransferase, putative (194 aa)
 
   
    0.605
R2601_26031
2’-deoxycytidine 5’-triphosphate deaminase (358 aa)
   
          0.572
R2601_14815
Hydrolase, NUDIX family protein (145 aa)
   
          0.527
rnpA
Protein C5 ; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (120 aa)
   
          0.518
R2601_23288
Disulfide bond formation protein, DsbB family (157 aa)
   
          0.495
R2601_08476
GCN5-related N-acetyltransferase (160 aa)
   
   
    0.489
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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