STRINGSTRING
R2601_17903 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17903" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17903Uncharacterized protein (249 aa)    
Predicted Functional Partners:
R2601_17898
Acetyltransferase, GNAT family protein (178 aa)
              0.765
R2601_12006
Uncharacterized protein (507 aa)
   
          0.756
R2601_21802
Uncharacterized protein (117 aa)
   
          0.715
R2601_09225
Uncharacterized protein (241 aa)
   
          0.704
R2601_25316
Acetyltransferase, GNAT family protein (148 aa)
   
          0.676
R2601_24884
Uncharacterized protein (235 aa)
   
          0.673
R2601_18173
Uncharacterized protein (447 aa)
   
          0.662
R2601_19260
Uncharacterized protein (150 aa)
   
          0.656
R2601_25371
Tellurite resistance protein (134 aa)
   
          0.650
R2601_05668
Uncharacterized protein (147 aa)
   
          0.634
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (6%) [HD]