STRINGSTRING
R2601_17908 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17908" - Phosphoenolpyruvate-protein phosphotransferase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17908Phosphoenolpyruvate-protein phosphotransferase (744 aa)    
Predicted Functional Partners:
R2601_16860
Phosphocarrier protein HPr (92 aa)
   
  0.927
R2601_15522
PTS IIA-like nitrogen-regulatory protein PtsN (154 aa)
   
     
  0.792
R2601_17913
Aspartokinase (412 aa)
              0.778
R2601_16875
Hpr serine kinase/phosphatase domain protein (142 aa)
   
     
  0.643
R2601_17933
Uncharacterized protein (153 aa)
 
   
  0.623
R2601_16865
PTS system IIA component, Man family protein (132 aa)
   
     
  0.571
nudH
(Di)nucleoside polyphosphate hydrolase ; Accelerates the degradation of transcripts by removing pyrophosphate from the 5’-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage (160 aa)
   
   
  0.561
R2601_09245
Prolipoprotein diacylglyceryl transferase ; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (295 aa)
 
        0.547
R2601_07128
Prolipoprotein diacylglyceryl transferase ; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (306 aa)
 
        0.526
R2601_17928
Uncharacterized protein (144 aa)
              0.490
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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