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R2601_18148 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_18148" - ABC transporter ATP-binding protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_18148ABC transporter ATP-binding protein (537 aa)    
Predicted Functional Partners:
R2601_18143
ABC transporter permease protein (266 aa)
 
  0.978
R2601_18138
ABC transporter permease protein (325 aa)
 
 
  0.963
R2601_18133
Extracellular solute-binding protein, family 5 (515 aa)
 
 
  0.934
R2601_18153
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein (299 aa)
              0.861
R2601_05813
Peptide ABC transporter, permease protein (306 aa)
 
  0.843
R2601_19729
ABC transporter, membrane spanning protein (Oligopeptide) (314 aa)
 
  0.841
R2601_20771
ABC transporter permease protein (312 aa)
 
  0.841
R2601_21502
ABC peptide transporter, inner membrane subunit (116 aa)
 
  0.840
R2601_15702
Probable inner membrane component of binding-protein-dependent transport system (316 aa)
 
 
  0.838
R2601_10499
ABC peptide transporter, substrate binding protein (630 aa)
   
    0.836
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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