STRINGSTRING
R2601_18198 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_18198" - Chromosome replication initiation inhibitor protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_18198Chromosome replication initiation inhibitor protein (291 aa)    
Predicted Functional Partners:
R2601_18203
L-lysine exporter, putative (215 aa)
 
   
  0.952
clpS
ATP-dependent Clp protease adapter protein ClpS ; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (120 aa)
     
      0.718
R2601_21427
Helix-turn-helix, AraC type (334 aa)
   
   
  0.543
R2601_18208
Uncharacterized protein (285 aa)
              0.539
R2601_09757
Mg2+ and Co2+ transporters (330 aa)
     
      0.496
R2601_24634
Putative transcription regulator protein (356 aa)
       
 
  0.471
R2601_00165
Transcriptional regulator, LacI family protein (338 aa)
       
 
  0.471
R2601_25126
Transcriptional regulator, AraC family protein (256 aa)
     
   
  0.467
R2601_20871
Transcriptional regulator, AraC family protein (334 aa)
     
   
  0.467
R2601_13409
Transcriptional regulator, AraC family protein (288 aa)
     
   
  0.467
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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