STRINGSTRING
R2601_18243 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_18243" - Cytidine deaminase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_18243Cytidine deaminase (130 aa)    
Predicted Functional Partners:
R2601_18248
Thymidine phosphorylase (429 aa)
 
  0.999
tdk
Thymidine kinase (203 aa)
 
 
  0.984
deoB
Phosphodeoxyribomutase ; Phosphotransfer between the C1 and C5 carbon atoms of pentose (401 aa)
 
   
  0.961
R2601_18258
Adenosine deaminase (333 aa)
 
   
  0.903
deoD
Purine nucleoside phosphorylase DeoD-type (234 aa)
 
   
  0.902
ybeY
Endoribonuclease YbeY ; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (160 aa)
            0.851
R2601_20576
Alkaline phosphatase (2191 aa)
   
 
    0.820
R2601_12655
Ser/Thr protein phosphatase/nucleotidase, putative (519 aa)
 
 
    0.815
surE
Nucleoside 5’-monophosphate phosphohydrolase ; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (261 aa)
       
    0.791
R2601_17324
2’,3’-cyclic nucleotide 2’-phosphodiesterase/3’-nucleotidase bifunctional periplasmic protein (658 aa)
   
 
    0.791
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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