STRINGSTRING
R2601_18323 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_18323" - Capsular polysaccharide export protein KpsC in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_18323Capsular polysaccharide export protein KpsC (709 aa)    
Predicted Functional Partners:
R2601_18328
Polysaccharide biosynthesis/export protein (383 aa)
 
     
  0.970
R2601_18333
Capsular polysaccharide export protein KpsS (430 aa)
 
     
  0.955
R2601_11519
Capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family (600 aa)
 
     
  0.888
R2601_11524
Capsular polysaccharide export ATP-binding protein (219 aa)
 
     
  0.826
R2601_14625
Putative capsule polysaccharide exporter (363 aa)
 
     
  0.800
R2601_26181
Uncharacterized protein (419 aa)
 
          0.780
R2601_15527
Uncharacterized protein (475 aa)
   
          0.738
R2601_15532
Core-2/I-branching enzyme family protein (566 aa)
   
          0.736
R2601_13229
Uncharacterized protein (257 aa)
   
          0.714
R2601_13614
EpsK domain protein (525 aa)
   
          0.710
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (7%) [HD]