STRINGSTRING
R2601_18523 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_18523" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_18523Uncharacterized protein (141 aa)    
Predicted Functional Partners:
R2601_18538
Metallo-beta-lactamase family protein (288 aa)
          0.918
R2601_18533
YeeE/YedE family protein (141 aa)
 
          0.884
R2601_18528
YeeE/YedE family protein (145 aa)
 
          0.877
R2601_12810
Beta-lactamase-like protein (291 aa)
          0.747
R2601_12830
Uncharacterized protein (256 aa)
 
          0.528
R2601_02213
FAD-dependent pyridine nucleotide-disulphide oxidoreductase (392 aa)
 
   
    0.494
R2601_11961
Pyridine nucleotide-disulphide oxidoreductase family protein (402 aa)
 
   
    0.487
R2601_16335
Uncharacterized protein (557 aa)
 
   
 
0.464
R2601_23485
Uncharacterized protein (250 aa)
              0.451
R2601_18845
Putative integral membrane protein (252 aa)
              0.451
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (17%) [HD]