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R2601_18850 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_18850" - 2-dehydro-3-deoxygalactonokinase, putative in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_188502-dehydro-3-deoxygalactonokinase, putative (276 aa)    
Predicted Functional Partners:
R2601_05328
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase (213 aa)
 
 
  0.996
R2601_03208
Uncharacterized protein (378 aa)
 
 
  0.902
R2601_05323
2-keto-3-deoxy-galactonokinase (319 aa)
   
          0.778
R2601_05723
Smp-30/Cgr1 family protein (282 aa)
 
     
  0.765
R2601_25556
KDPG/KHG bifunctional aldolase (215 aa)
   
 
  0.747
R2601_05738
Putative d-galactose 1-dehydrogenase protein (308 aa)
 
          0.719
R2601_05298
Dihydroxy-acid dehydratase (598 aa)
 
     
  0.668
R2601_02998
Isomerase/lactonizing enzyme (382 aa)
 
 
    0.646
R2601_18855
Uncharacterized protein (162 aa)
              0.642
R2601_18845
Putative integral membrane protein (252 aa)
              0.640
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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