STRINGSTRING
R2601_19060 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_19060" - Coenzyme A transferase, putative in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_19060Coenzyme A transferase, putative (504 aa)    
Predicted Functional Partners:
R2601_19564
Methylmalonyl-CoA mutase (709 aa)
 
 
  0.993
R2601_10759
Succinate dehydrogenase flavoprotein subunit (601 aa)
   
 
    0.980
R2601_10679
Methylmalonyl-CoA mutase (665 aa)
   
 
  0.925
R2601_19065
Putative decarboxylase (416 aa)
       
    0.888
R2601_25786
Acetyl-CoA acetyltransferase (403 aa)
   
 
  0.883
R2601_17724
Acetyl-CoA C-acetyltransferase (390 aa)
   
 
  0.883
R2601_12171
Beta-ketothiolase (392 aa)
   
 
  0.883
R2601_11851
Acetyl-CoA acetyltransferase (391 aa)
   
 
  0.883
R2601_06493
Beta-ketothiolase protein (399 aa)
   
 
  0.883
R2601_04308
Beta-ketothiolase (428 aa)
   
 
  0.883
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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