STRINGSTRING
R2601_19065 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_19065" - Putative decarboxylase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_19065Putative decarboxylase (416 aa)    
Predicted Functional Partners:
R2601_05228
Uncharacterized protein (200 aa)
 
 
  0.897
R2601_19060
Coenzyme A transferase, putative (504 aa)
       
    0.888
R2601_05223
Uncharacterized protein (328 aa)
 
 
  0.864
acsA
Acyl-activating enzyme ; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (656 aa)
     
 
  0.814
R2601_21717
Acetyl-coenzyme A synthetase (524 aa)
     
 
  0.813
R2601_23775
2-isopropylmalate synthase (545 aa)
   
 
    0.790
leuA
Alpha-isopropylmalate synthase ; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (521 aa)
   
 
    0.790
R2601_25786
Acetyl-CoA acetyltransferase (403 aa)
     
 
    0.786
R2601_17724
Acetyl-CoA C-acetyltransferase (390 aa)
     
 
    0.786
R2601_12171
Beta-ketothiolase (392 aa)
     
 
    0.786
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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