STRINGSTRING
R2601_19185 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_19185" - Low molecular weight phosphotyrosine protein phosphatase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_19185Low molecular weight phosphotyrosine protein phosphatase (151 aa)    
Predicted Functional Partners:
R2601_04698
Exopolysaccharide polymerization/transport protein (763 aa)
   
 
  0.987
R2601_17644
Fructosamine-3-kinase (265 aa)
        0.946
R2601_15125
Uncharacterized protein (490 aa)
   
 
  0.816
R2601_15215
Exopolysaccharide biosynthesis domain protein (380 aa)
   
 
  0.738
R2601_08858
Iron-sulfur cluster carrier protein ; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (354 aa)
   
 
  0.738
R2601_05113
Iron-sulfur cluster carrier protein ; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (354 aa)
   
 
  0.738
R2601_14940
Thioredoxin (106 aa)
 
 
  0.710
R2601_19180
NAD-dependent deacetylase (229 aa)
              0.690
R2601_18328
Polysaccharide biosynthesis/export protein (383 aa)
   
   
  0.673
R2601_15100
Polysaccharide biosynthesis/export protein (405 aa)
   
   
  0.673
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (10%) [HD]