STRINGSTRING
R2601_19235 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_19235" - Uncharacterized protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_19235Uncharacterized protein (232 aa)    
Predicted Functional Partners:
R2601_19240
Alcohol dehydrogenase, zinc-containing (323 aa)
   
      0.881
ubiE
Demethylmenaquinone methyltransferase ; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) (250 aa)
   
 
  0.760
R2601_09532
Uncharacterized protein (237 aa)
   
        0.750
rpsU
30S ribosomal protein S21 (68 aa)
              0.750
R2601_19397
2-octaprenyl-6-methoxyphenyl hydroxylase (397 aa)
   
 
  0.741
R2601_11996
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein (417 aa)
   
 
  0.735
R2601_16750
Uncharacterized protein (173 aa)
   
          0.721
R2601_26316
PQQ enzyme repeat family protein (443 aa)
   
          0.678
R2601_14455
Probable protein kinase UbiB ; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis (510 aa)
 
 
  0.631
R2601_14950
Uncharacterized protein (976 aa)
   
          0.625
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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