STRINGSTRING
R2601_19245 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_19245" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_19245Uncharacterized protein (284 aa)    
Predicted Functional Partners:
R2601_27056
Uncharacterized protein (148 aa)
   
          0.609
R2601_13204
Uncharacterized protein (124 aa)
   
          0.544
R2601_19250
Quinone oxidoreductase, putative (328 aa)
              0.536
R2601_21306
Uncharacterized protein (156 aa)
   
          0.512
R2601_05158
Uncharacterized protein (171 aa)
   
          0.503
R2601_09842
Ubiquinol--cytochrome c reductase, cytochrome c1 (264 aa)
   
   
    0.488
R2601_12770
Uncharacterized protein (253 aa)
   
          0.452
R2601_23208
Cytochrome-c oxidase chain II/c (319 aa)
       
    0.421
R2601_01420
Resolvase (547 aa)
   
        0.421
R2601_10529
Uncharacterized protein (116 aa)
   
          0.421
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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