STRINGSTRING
R2601_19599 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_19599" - DNA polymerase III subunit delta in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_19599DNA polymerase III subunit delta (372 aa)    
Predicted Functional Partners:
R2601_17304
DNA polymerase III subunits gamma and tau (588 aa)
 
0.997
R2601_10369
DNA-directed DNA polymerase (1174 aa)
   
  0.994
R2601_14420
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (372 aa)
 
  0.993
R2601_12473
Uncharacterized protein (342 aa)
   
  0.984
R2601_15447
DNA polymerase I (935 aa)
   
  0.978
tmk
dTMP kinase ; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (208 aa)
 
 
  0.970
dnaE2
Error-prone DNA polymerase ; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase (1078 aa)
   
  0.967
R2601_24355
DNA polymerase III subunit chi (152 aa)
   
  0.936
R2601_19609
D-alanyl-D-alanine carboxypeptidase (391 aa)
     
      0.924
R2601_19614
Lipoprotein, putative (312 aa)
 
          0.901
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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