STRINGSTRING
R2601_20049 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20049" - Thiolase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20049Thiolase (384 aa)    
Predicted Functional Partners:
R2601_17988
Enoyl-CoA hydratase (634 aa)
 
  0.998
R2601_18553
Enoyl-CoA hydratase/isomerase-3-hydroxyacyl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein (666 aa)
 
  0.998
R2601_20059
Uncharacterized protein (287 aa)
 
  0.992
R2601_20064
Probable enoyl-CoA hydratase/isomerase (253 aa)
   
  0.982
R2601_02538
3-hydroxybutyryl-CoA dehydrogenase (473 aa)
   
  0.980
R2601_20044
Uncharacterized protein (126 aa)
 
          0.973
R2601_20054
CoA-binding protein (706 aa)
 
 
  0.973
R2601_20034
Acyl-CoA dehydrogenase (384 aa)
   
 
  0.969
R2601_01280
3-hydroxybutyryl-CoA dehydrogenase (316 aa)
 
  0.952
R2601_25791
Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase (733 aa)
   
  0.946
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (8%) [HD]