STRINGSTRING
R2601_20064 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20064" - Probable enoyl-CoA hydratase/isomerase in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20064Probable enoyl-CoA hydratase/isomerase (253 aa)    
Predicted Functional Partners:
R2601_20034
Acyl-CoA dehydrogenase (384 aa)
 
  0.986
R2601_20049
Thiolase (384 aa)
   
  0.982
R2601_16850
3-hydroxybutyryl-CoA dehydrogenase (291 aa)
  0.966
R2601_02538
3-hydroxybutyryl-CoA dehydrogenase (473 aa)
 
  0.962
R2601_23333
Sensory box sensor histidine kianse/response regulator (594 aa)
   
  0.957
R2601_06493
Beta-ketothiolase protein (399 aa)
   
  0.955
R2601_20059
Uncharacterized protein (287 aa)
   
 
  0.954
R2601_20019
Putative acyl-CoA dehydrogenase (387 aa)
   
  0.950
R2601_25771
Acyl-CoA dehydrogenase family protein (593 aa)
   
  0.947
R2601_13860
Acyl-CoA dehydrogenase family protein (566 aa)
   
  0.947
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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