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R2601_20079 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20079" - Possible TrapT family, dctP subunit, C4-dicarboxylate periplasmic binding protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20079Possible TrapT family, dctP subunit, C4-dicarboxylate periplasmic binding protein (376 aa)    
Predicted Functional Partners:
R2601_20084
Uncharacterized protein (657 aa)
 
   
    0.992
R2601_26706
TRAP transporter, 4TM/12TM fusion protein (875 aa)
 
          0.690
R2601_00820
TRAP-T family transporter with fused DctQ/DctM subunits (698 aa)
 
          0.690
R2601_02413
Uncharacterized protein (768 aa)
 
          0.663
R2601_20089
3-oxoadipate CoA-transferase, alpha subunit (221 aa)
              0.663
R2601_06443
Uncharacterized protein (616 aa)
 
          0.646
R2601_20099
Citrate lyase beta chain (301 aa)
              0.645
R2601_20094
Probable 3-oxoadipate coa-transferase subunit b protein (211 aa)
              0.645
R2601_02418
TRAP-T family transporter, periplasmic substrate binding subunit (320 aa)
   
          0.637
R2601_26701
TRAP transporter solute receptor, TAXI family protein (321 aa)
   
          0.635
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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