STRINGSTRING
R2601_20264 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20264" - Sensory box histidine kinase/response regulator in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20264Sensory box histidine kinase/response regulator (205 aa)    
Predicted Functional Partners:
R2601_09997
Sensor histidine kinase/response regulator (524 aa)
   
          0.726
R2601_06538
Uncharacterized protein (464 aa)
   
          0.689
R2601_20269
Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB5 (519 aa)
 
          0.663
R2601_06378
Uncharacterized protein (412 aa)
   
          0.555
R2601_22586
Uncharacterized protein (449 aa)
   
          0.524
R2601_09892
Uncharacterized protein (365 aa)
   
          0.484
R2601_25446
Endonuclease/exonuclease/phosphatase family protein (295 aa)
   
          0.467
R2601_15885
Uncharacterized protein (295 aa)
   
          0.448
R2601_06428
Rieske (2Fe-2S) region (312 aa)
   
          0.435
R2601_08581
Beta-lactamase related protein (388 aa)
   
          0.426
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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