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R2601_20326 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20326" - Transcriptional regulator, ROK family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20326Transcriptional regulator, ROK family protein (390 aa)    
Predicted Functional Partners:
R2601_20321
ABC sugar transporter, periplasmic sugar binding subunit (331 aa)
 
     
  0.874
R2601_20311
ABC transporter, nucleotide binding/ATPase protein (Sugar) (259 aa)
 
     
  0.873
R2601_04743
Mannose-6-phosphate isomerase, type II (477 aa)
       
  0.867
R2601_16932
Putative Fructokinase (299 aa)
 
   
  0.792
R2601_20316
ABC sugar transporter, inner membrane subunit (356 aa)
 
   
  0.759
R2601_18103
N-acetylglucosamine-6-phosphate deacetylase (379 aa)
 
   
  0.732
R2601_25301
6-phosphogluconolactonase (225 aa)
     
  0.710
pgi
Phosphohexose isomerase (527 aa)
       
  0.700
R2601_20751
Putative dihydrodipicolinate synthetase (293 aa)
   
 
  0.698
dapA
4-hydroxy-tetrahydrodipicolinate synthase ; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (286 aa)
   
 
  0.698
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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