STRINGSTRING
R2601_20336 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20336" - Sugar isomerase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20336Sugar isomerase (SIS) (285 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase (aminomethyl-transferring) ; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (948 aa)
       
    0.762
zwf
Glucose-6-phosphate 1-dehydrogenase ; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone (486 aa)
   
 
  0.673
R2601_20331
Uncharacterized protein (303 aa)
              0.625
R2601_20346
Probable transporter (427 aa)
         
  0.619
R2601_20341
C4-dicarboxylate transport system permease small protein (164 aa)
              0.605
R2601_02478
Dihydrodipicolinate synthase (295 aa)
 
 
  0.604
R2601_00560
Uncharacterized protein (307 aa)
 
 
  0.599
R2601_05253
Putative gluconate dehydrogenase (589 aa)
   
   
    0.578
R2601_25556
KDPG/KHG bifunctional aldolase (215 aa)
   
 
  0.557
R2601_05328
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase (213 aa)
   
 
  0.557
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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