STRINGSTRING
R2601_20366 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20366" - N-carbamyl-D-amino acid amidohydrolase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20366N-carbamyl-D-amino acid amidohydrolase (302 aa)    
Predicted Functional Partners:
R2601_20361
N-carbamoyl-L-amino acid amidohydrolase (409 aa)
 
 
  0.949
R2601_20356
Diaminopropionate ammonia-lyase (413 aa)
   
      0.894
R2601_12990
Glutamate synthase, large subunit (1537 aa)
       
  0.869
R2601_11831
Dihydropyrimidine dehydrogenase (434 aa)
   
 
  0.859
R2601_14750
NADP-dependent malic enzyme (751 aa)
       
    0.817
R2601_10082
Malic enzyme (759 aa)
       
    0.817
R2601_18985
Bifunctional protein PutA ; Oxidizes proline to glutamate for use as a carbon and nitrogen source (1142 aa)
   
 
    0.816
R2601_08848
Putative Ornithine decarboxylase (375 aa)
   
 
  0.802
R2601_07861
Diaminobutyrate--2-oxoglutarate aminotransferase (424 aa)
 
 
  0.801
R2601_26101
Uncharacterized protein (456 aa)
     
 
  0.795
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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