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R2601_20431 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20431" - Acetyltransferase, GNAT family protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20431Acetyltransferase, GNAT family protein (159 aa)    
Predicted Functional Partners:
R2601_20421
Aminotransferase, class III (445 aa)
 
 
    0.913
R2601_20436
Acetylpolyamine aminohydrolase (340 aa)
 
 
  0.909
R2601_20426
Uncharacterized protein (308 aa)
 
          0.888
R2601_20411
Spermidine/putrescine ABC transporter, periplasmic substrate-binding protein (381 aa)
 
          0.886
R2601_20416
Polyamine-transporting ATPase ; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (361 aa)
 
          0.879
R2601_27141
Dihydropteroate synthase, DHPS-Homocysteine S-methyltransferase-Cobalamin-dependent methionine (1256 aa)
       
  0.818
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
   
 
    0.816
R2601_20396
Transcriptional regulator, LysR family protein (342 aa)
 
          0.802
R2601_14750
NADP-dependent malic enzyme (751 aa)
       
  0.665
R2601_10082
Malic enzyme (759 aa)
       
  0.665
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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