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R2601_20491 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20491" - Sugar isomerase in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20491Sugar isomerase (SIS) (337 aa)    
Predicted Functional Partners:
R2601_20496
Putative sugar kinase protein (264 aa)
 
   
  0.950
R2601_20456
AP endonuclease, family 2 (276 aa)
 
          0.728
R2601_18103
N-acetylglucosamine-6-phosphate deacetylase (379 aa)
   
 
  0.698
R2601_26471
BadF/BadG/BcrA/BcrD ATPase family protein (281 aa)
       
  0.667
R2601_15240
Phosphofructokinase (317 aa)
 
   
    0.664
R2601_20446
Transcriptional regulator, GntR family protein (241 aa)
 
          0.658
R2601_20486
Arginosuccinase (499 aa)
 
          0.657
R2601_04278
Transcriptional regulator, GntR family protein (247 aa)
 
     
  0.655
R2601_20476
ABC amino acid transporter, inner membrane subunit (243 aa)
 
          0.639
R2601_20451
Asparaginase/glutaminase (338 aa)
 
   
    0.590
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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