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R2601_20506 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20506" - Probable ferric iron transport system permease protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20506Probable ferric iron transport system permease protein (568 aa)    
Predicted Functional Partners:
R2601_20511
Iron-binding periplasmic protein (323 aa)
 
 
  0.994
R2601_20501
ABC transporter component (357 aa)
 
  0.993
R2601_24280
ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein (333 aa)
 
 
  0.933
R2601_21667
Iron ABC transporter, ATP-binding protein, putative (359 aa)
 
  0.905
R2601_01060
ABC transporter ATP-binding protein (352 aa)
 
  0.897
R2601_19994
Uncharacterized protein (333 aa)
   
 
  0.892
R2601_20416
Polyamine-transporting ATPase ; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (361 aa)
 
  0.884
R2601_27001
Probable spermidineputrescine ABC transporter ATP-binding protein (360 aa)
 
  0.884
R2601_18573
Putative iron(III) ABC transporter, fused inner membrane subunits (552 aa)
   
   
    0.883
R2601_02583
ABC transporter, ATP-binding protein (350 aa)
 
  0.878
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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