STRINGSTRING
R2601_20641 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20641" - Acyl-CoA synthase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20641Acyl-CoA synthase (528 aa)    
Predicted Functional Partners:
R2601_18553
Enoyl-CoA hydratase/isomerase-3-hydroxyacyl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein (666 aa)
   
  0.957
R2601_17988
Enoyl-CoA hydratase (634 aa)
   
  0.957
R2601_20646
MaoC-related acyl dehydratase (152 aa)
   
 
  0.937
R2601_20626
Branched amino acid ABC transporter (Permease) (291 aa)
   
        0.860
R2601_20636
ABC transporter, ATPase subunit (236 aa)
              0.859
R2601_20631
Branched-chain amino acid transport ATP-binding protein livG (254 aa)
              0.859
R2601_02538
3-hydroxybutyryl-CoA dehydrogenase (473 aa)
   
  0.843
R2601_20621
Hydrophobic amino acid ABC transporter (HAAT) family, permease protein (289 aa)
   
        0.835
R2601_19564
Methylmalonyl-CoA mutase (709 aa)
       
  0.828
R2601_10679
Methylmalonyl-CoA mutase (665 aa)
       
  0.828
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (6%) [HD]