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R2601_20746 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20746" - Putative extracellular solute-binding protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20746Putative extracellular solute-binding protein (516 aa)    
Predicted Functional Partners:
R2601_20766
ABC transporter permease protein (323 aa)
 
  0.987
R2601_20771
ABC transporter permease protein (312 aa)
 
  0.987
R2601_19724
Probable dipeptide transmembrane abc transporter protein (324 aa)
 
 
  0.962
R2601_19729
ABC transporter, membrane spanning protein (Oligopeptide) (314 aa)
  0.962
R2601_20776
ABC transporter ATP-binding protein (607 aa)
 
 
  0.945
R2601_03043
ABC transporter, membrane spanning protein (305 aa)
 
  0.924
R2601_01190
Putative oligopeptide ABC transporter, permease component (270 aa)
  0.916
R2601_20751
Putative dihydrodipicolinate synthetase (293 aa)
 
 
      0.912
R2601_05818
Oligopeptide/dipeptide ABC transporter, permease protein (298 aa)
  0.911
R2601_03038
ABC transporter, membrane spanning protein (300 aa)
  0.905
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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