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R2601_20756 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20756" - Putative nucleoside hydrolase protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20756Putative nucleoside hydrolase protein (321 aa)    
Predicted Functional Partners:
R2601_20781
Ribose kinase protein (296 aa)
 
 
  0.988
R2601_14755
Ribokinase (292 aa)
 
 
  0.910
R2601_20761
Putative nucleoside hydrolase (323 aa)
 
       
0.876
R2601_20776
ABC transporter ATP-binding protein (607 aa)
              0.859
R2601_20771
ABC transporter permease protein (312 aa)
              0.859
R2601_20766
ABC transporter permease protein (323 aa)
              0.859
R2601_20576
Alkaline phosphatase (2191 aa)
   
 
    0.858
R2601_21957
Xanthine dehydrogenase family protein, small/large subunits (905 aa)
     
 
    0.818
R2601_20751
Putative dihydrodipicolinate synthetase (293 aa)
 
        0.787
R2601_17883
5’-methylthioadenosine phosphorylase (291 aa)
     
  0.746
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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