STRINGSTRING
R2601_20926 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20926" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20926Uncharacterized protein (198 aa)    
Predicted Functional Partners:
R2601_20921
Uncharacterized protein (246 aa)
   
 
  0.878
R2601_20931
Glyoxalase family protein (145 aa)
              0.861
eno
2-phosphoglycerate dehydratase ; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (424 aa)
   
 
  0.830
R2601_22257
Phosphoglycerate kinase (392 aa)
   
 
  0.814
R2601_17399
Phosphoglycerate kinase (402 aa)
   
 
  0.814
cobS
Cobalamin-5’-phosphate synthase ; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5’-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5’-phosphate (249 aa)
 
 
  0.662
R2601_27031
Uncharacterized protein (160 aa)
   
          0.638
cobT
N(1)-alpha-phosphoribosyltransferase ; Catalyzes the synthesis of alpha-ribazole-5’-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) (339 aa)
   
 
  0.627
R2601_08371
Dihydrolipoamide acetyltransferase (461 aa)
   
  0.621
R2601_12398
Putative Phenylacetic acid degradation protein PAAI (135 aa)
 
        0.607
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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