STRINGSTRING
R2601_20996 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20996" - Guanine deaminase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20996Guanine deaminase (186 aa)    
Predicted Functional Partners:
deoD
Purine nucleoside phosphorylase DeoD-type (234 aa)
 
   
    0.915
R2601_08843
Xanthine dehydrogenase family protein, large subunit (763 aa)
       
    0.900
R2601_02293
Probable oxidoreductase (726 aa)
       
    0.900
R2601_21952
Xanthine dehydrogenase family protein, medium subunit (282 aa)
         
    0.900
R2601_02298
Possible oxidoreductase, molybdopterin-binding subunit (316 aa)
         
    0.900
R2601_20991
Allergen V5/Tpx-1 related protein (158 aa)
 
       
0.641
R2601_23720
Uncharacterized protein (306 aa)
   
          0.453
R2601_20986
Hydroxydechloroatrazine ethylaminohydrolase (446 aa)
              0.451
R2601_26376
Outer membrane protein, OmpA/MotB family (674 aa)
   
          0.446
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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