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R2601_21196 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_21196" - ABC zinc tranporter, inner membrane subunit ZnuB in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
R2601_21196ABC zinc tranporter, inner membrane subunit ZnuB (262 aa)    
Predicted Functional Partners:
znuC
Zinc import ATP-binding protein ZnuC ; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system (259 aa)
 
  0.999
R2601_21181
Zinc ABC transporter, periplasmic zinc-binding protein (359 aa)
 
 
  0.991
R2601_27131
ABC Mn+2/Fe+2 transporter, ATPase subunit SitB (296 aa)
 
  0.927
R2601_21186
Zinc uptake regulation protein (163 aa)
 
   
  0.918
R2601_27136
ABC Mn+2/Fe+2 transporter, periplasmic substrate-binding protein SitA (300 aa)
 
 
  0.901
secY
Protein translocase subunit SecY ; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (447 aa)
       
 
  0.872
rpmA
50S ribosomal protein L27 (89 aa)
       
      0.870
rplA
50S ribosomal protein L1 ; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (233 aa)
       
      0.870
rplW
50S ribosomal protein L23 ; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (89 aa)
       
      0.870
rplN
50S ribosomal protein L14 ; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (122 aa)
       
      0.870
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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