STRINGSTRING
R2601_21291 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_21291" - Hydrolase, alpha/beta fold family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
R2601_21291Hydrolase, alpha/beta fold family protein (254 aa)    
Predicted Functional Partners:
R2601_08371
Dihydrolipoamide acetyltransferase (461 aa)
 
 
    0.851
R2601_18985
Bifunctional protein PutA ; Oxidizes proline to glutamate for use as a carbon and nitrogen source (1142 aa)
     
 
    0.814
R2601_19564
Methylmalonyl-CoA mutase (709 aa)
       
    0.812
R2601_10679
Methylmalonyl-CoA mutase (665 aa)
       
    0.812
map
Peptidase M ; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed (282 aa)
   
  0.792
R2601_22042
Delta-aminolevulinate synthase (407 aa)
   
  0.754
kbl
Glycine acetyltransferase ; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA (395 aa)
   
  0.754
R2601_12825
Putative cycloisomerase (375 aa)
   
 
  0.693
R2601_12528
Mandelate racemase/muconate lactonizing enzyme family protein (329 aa)
   
 
  0.693
R2601_03208
Uncharacterized protein (378 aa)
   
 
  0.693
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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