STRINGSTRING
R2601_21422 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_21422" - Probable 1,4-butanediol diacrylate esterase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_21422Probable 1,4-butanediol diacrylate esterase (431 aa)    
Predicted Functional Partners:
R2601_21427
Helix-turn-helix, AraC type (334 aa)
 
          0.943
R2601_21406
Cyclohexanone monooxygenase (543 aa)
 
 
    0.852
R2601_26051
Beta-N-acetylhexosaminidase (335 aa)
       
  0.666
anmK
AnhMurNAc kinase ; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling (362 aa)
       
  0.661
R2601_13464
Amidase (504 aa)
 
   
  0.615
R2601_21437
Uncharacterized protein (599 aa)
 
 
    0.580
glcB
Malate synthase G ; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA (715 aa)
       
      0.552
R2601_18158
Amidase (464 aa)
 
   
  0.507
R2601_21126
Penicillin-binding protein (596 aa)
   
 
  0.476
R2601_10639
Beta-lactamase (625 aa)
   
 
  0.476
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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