STRINGSTRING
R2601_21437 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_21437" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_21437Uncharacterized protein (599 aa)    
Predicted Functional Partners:
R2601_16630
2,4-dienoyl-CoA reductase (669 aa)
   
 
  0.822
R2601_01613
2,4-dienoyl-CoA reductase (NADPH) protein (678 aa)
   
 
  0.822
R2601_21432
Putative acetoin catabolism regulatory protein (579 aa)
 
          0.819
R2601_21442
L-iditol 2-dehydrogenase (342 aa)
 
 
    0.745
R2601_05478
Cytochrome P450-like protein (432 aa)
 
  0.605
R2601_04093
Probable short-chain dehydrogenase (104 aa)
 
 
    0.591
R2601_21422
Probable 1,4-butanediol diacrylate esterase (431 aa)
 
 
    0.580
R2601_16550
Possible polysaccharide deacetylase (471 aa)
   
        0.558
R2601_01315
Polysaccharide deacetylase family protein (463 aa)
   
        0.558
R2601_27313
Uncharacterized protein (232 aa)
 
 
    0.539
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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