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R2601_21527 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_21527" - 27 kDa outer membrane protein, putative in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_2152727 kDa outer membrane protein, putative (257 aa)    
Predicted Functional Partners:
R2601_07023
Thiol-disulfide interchange protein dsbD 1 (709 aa)
 
  0.941
R2601_21532
Peptidase, M48 family protein (446 aa)
              0.813
R2601_21537
Aminotransferase, classes I and II (381 aa)
              0.708
R2601_18223
Putative periplasmic thiol-disulphide interchange protein (DsbA family) (214 aa)
 
     
  0.684
R2601_13880
Uncharacterized protein (234 aa)
 
   
  0.576
R2601_23288
Disulfide bond formation protein, DsbB family (157 aa)
   
 
  0.528
R2601_07218
Disulfide bond formation protein, DsbB family (140 aa)
   
 
  0.528
R2601_16435
F-ATPase subunit 6 ; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane (254 aa)
 
          0.528
R2601_26186
Cytochrome c-type biogenesis protein CcdA (250 aa)
         
  0.514
R2601_18358
Sulfur oxidation V protein (245 aa)
         
  0.514
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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