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R2601_21542 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_21542" - N-acetylmuramoyl-L-alanine amidase, family 3 in Pelagibaca bermudensis
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
R2601_21542N-acetylmuramoyl-L-alanine amidase, family 3 (400 aa)    
Predicted Functional Partners:
R2601_26051
Beta-N-acetylhexosaminidase (335 aa)
   
 
  0.981
R2601_21547
Penicillin-binding protein 1A (845 aa)
 
 
      0.799
R2601_21537
Aminotransferase, classes I and II (381 aa)
         
  0.756
R2601_12950
Penicillin-binding protein, 1A family (727 aa)
   
 
  0.706
rnhB
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (215 aa)
 
     
  0.679
murE
UDP-N-acetylmuramyl-tripeptide synthetase (494 aa)
 
 
  0.649
R2601_24734
Nicotinamide nucleotide repair protein ; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (536 aa)
   
   
  0.614
miaA
Isopentenyl-diphosphate-tRNA isopentenyltransferase ; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (304 aa)
 
     
  0.610
murI
Glutamate racemase ; Provides the (R)-glutamate required for cell wall biosynthesis (270 aa)
 
 
 
  0.602
R2601_14170
Ribonuclease R (506 aa)
 
          0.599
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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