STRINGSTRING
R2601_21807 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_21807" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_21807Uncharacterized protein (140 aa)    
Predicted Functional Partners:
R2601_21802
Uncharacterized protein (117 aa)
 
          0.873
R2601_25356
Mechanosensitive ion channel family protein (419 aa)
   
          0.758
R2601_05668
Uncharacterized protein (147 aa)
   
          0.753
R2601_08686
Uncharacterized protein (116 aa)
   
          0.740
R2601_15502
Uncharacterized protein (202 aa)
   
          0.731
R2601_12006
Uncharacterized protein (507 aa)
   
          0.730
R2601_18173
Uncharacterized protein (447 aa)
   
          0.723
R2601_25066
Uncharacterized protein (190 aa)
   
          0.706
R2601_17749
Uncharacterized protein (174 aa)
   
          0.706
R2601_12915
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (87 aa)
   
          0.688
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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