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R2601_21882 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_21882" - Metallo-beta-lactamase family protein in Pelagibaca bermudensis
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
R2601_21882Metallo-beta-lactamase family protein (555 aa)    
Predicted Functional Partners:
coaX
Pantothenic acid kinase ; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis (259 aa)
              0.887
R2601_21872
Biotin--acetyl-CoA-carboxylase ligase (248 aa)
              0.866
rne
Ribonuclease E ; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs (985 aa)
     
 
  0.825
rnpA
Protein C5 ; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (120 aa)
       
  0.824
rnd
Ribonuclease D ; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides (385 aa)
     
 
    0.786
R2601_11004
Polyribonucleotide nucleotidyltransferase (463 aa)
   
 
  0.723
nuoN
NDH-1 subunit N ; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (480 aa)
              0.713
R2601_11009
Polyribonucleotide nucleotidyltransferase (250 aa)
   
 
  0.706
R2601_21862
NADH dehydrogenase subunit M (516 aa)
              0.706
R2601_09320
Ribonuclease, Rne/Rng family protein (283 aa)
     
 
  0.691
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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