STRINGSTRING
kbl protein (Pelagibaca bermudensis) - STRING interaction network
"kbl" - Glycine acetyltransferase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kblGlycine acetyltransferase ; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA (395 aa)    
Predicted Functional Partners:
tdh
L-threonine 3-dehydrogenase (345 aa)
 
  0.999
R2601_20421
Aminotransferase, class III (445 aa)
 
  0.929
R2601_11394
Uncharacterized protein (454 aa)
 
  0.929
R2601_18108
Uncharacterized protein (460 aa)
 
 
  0.919
R2601_26696
Uncharacterized protein (440 aa)
 
 
  0.919
R2601_26101
Uncharacterized protein (456 aa)
 
 
  0.919
R2601_13269
Uncharacterized protein (466 aa)
 
 
  0.919
R2601_10914
Taurine--pyruvate aminotransferase (462 aa)
 
 
  0.919
R2601_02148
Uncharacterized protein (456 aa)
 
 
  0.919
R2601_21442
L-iditol 2-dehydrogenase (342 aa)
   
  0.916
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (8%) [HD]