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R2601_21957 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_21957" - Xanthine dehydrogenase family protein, small/large subunits in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_21957Xanthine dehydrogenase family protein, small/large subunits (905 aa)    
Predicted Functional Partners:
R2601_21952
Xanthine dehydrogenase family protein, medium subunit (282 aa)
  0.999
R2601_03793
Carbon-monoxide dehydrogenase medium chain (316 aa)
  0.999
R2601_01235
Probable carbon monoxide dehydrogenase medium chain (277 aa)
 
  0.998
R2601_26416
Carbon monoxide dehydrogenase, medium subunit, putative (262 aa)
   
  0.997
R2601_02298
Possible oxidoreductase, molybdopterin-binding subunit (316 aa)
   
  0.997
R2601_22332
XdhC/CoxI family protein (325 aa)
 
 
  0.975
R2601_10349
Xanthine dehydrogenase accessory factor (316 aa)
 
 
  0.961
R2601_21947
Uncharacterized protein (476 aa)
 
   
    0.959
R2601_10359
Xanthine dehydrogenase, A subunit (460 aa)
 
 
0.953
R2601_08521
Isoquinoline 1-oxidoreductase, alpha subunit (152 aa)
 
0.941
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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