STRINGSTRING
R2601_21972 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_21972" - Aconitate hydratase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
R2601_21972Aconitate hydratase ; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (923 aa)    
Predicted Functional Partners:
R2601_25256
Citrate synthase (432 aa)
 
  0.998
R2601_19959
Citrate synthase (259 aa)
 
  0.997
R2601_22706
Aconitate hydratase (929 aa)
   
 
  0.989
leuB
Beta-IPM dehydrogenase ; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (367 aa)
   
  0.942
R2601_26156
Isocitrate dehydrogenase [NADP] (405 aa)
   
  0.928
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
   
  0.914
R2601_09178
Isocitrate lyase family protein (288 aa)
 
 
  0.910
R2601_06978
No annotation available (97 aa)
         
    0.900
R2601_02068
Probable tartrate dehydrogenase protein (347 aa)
   
  0.895
R2601_10829
2-oxoglutarate dehydrogenase, E1 component (990 aa)
 
 
  0.894
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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