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R2601_22057 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_22057" - Serine/Threonine protein kinase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_22057Serine/Threonine protein kinase (707 aa)    
Predicted Functional Partners:
R2601_16005
Probable phosphoprotein phosphatase (242 aa)
 
  0.971
R2601_22152
Protein phosphatase 2C-like protein (239 aa)
  0.971
R2601_22122
Uncharacterized protein (1184 aa)
 
        0.855
R2601_22197
Peptidase C14, caspase catalytic subunit p20 (491 aa)
   
 
    0.849
R2601_07718
Uncharacterized protein (635 aa)
   
 
    0.840
R2601_19442
Putative Metallo-phosphoesterase (249 aa)
   
  0.835
R2601_16325
Uncharacterized protein (239 aa)
   
  0.835
R2601_22117
Possible outer membrane protein, OmpA family (452 aa)
 
        0.829
R2601_23333
Sensory box sensor histidine kianse/response regulator (594 aa)
     
  0.826
gmk
GMP kinase ; Essential for recycling GMP and indirectly, cGMP (213 aa)
 
  0.803
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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